MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3019_ses-2_T1w.
  • Date and time: 2022-10-21, 21:53.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6190850190783861
cnr2.080618044935939
efc0.5438719954325991
fber1417.5349257698047
fwhmavg4.165086666666666
fwhmx4.07565
fwhmy4.69118
fwhmz3.72843
icvscsf0.19038257260537825
icvsgm0.4405565635512079
icvswm0.3690608638434138
inumed2.0875236988067627
inurange0.936624503135681
qi10.0
qi20.004457995318267573
rpvecsf30.613287749896504
rpvegm14.346311955740948
rpvewm19.519179454673715
sizex176
sizey256
sizez256
snrcsf2.903908103676039
snrgm9.713336598388176
snrtotal10.306459552758982
snrwm18.30213395621273
snrdcsf37.64114065560736
snrdgm82.19578897899548
snrdtotal74.42368630554778
snrdwm103.43412928204044
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk2.824719366634671
summarybgmad6.333851152755645
summarybgmean16.142250251040057
summarybgmedian14.709063410758972
summarybgn2817752.0
summarybgp056.2729829251766205
summarybgp9530.715985357761383
summarybgstdv7.816122955915343
summarycsfk61.64046603535391
summarycsfmad100.86056645780508
summarycsfmean390.81475369486503
summarycsfmedian363.9141258187592
summarycsfn18828.0
summarycsfp05246.36058889850975
summarycsfp95604.7831507857888
summarycsfstdv125.31541926414401
summarygmk0.12012841165237154
summarygmmad77.2489314643046
summarygmmean797.1833676564336
summarygmmedian794.6679662540555
summarygmn20672.0
summarygmp05665.8852491233498
summarygmp95941.4341357275844
summarygmstdv81.81006980400493
summarywmk0.5218562417950459
summarywmmad49.86905591156976
summarywmmean999.2869361987636
summarywmmedian1000.0000021755695
summarywmn179963.0
summarywmp05904.9372721396387
summarywmp951087.6595308110118
summarywmstdv54.63828568926893
tpmoverlapcsf0.1569129228591919
tpmoverlapgm0.4543919861316681
tpmoverlapwm0.49329009652137756
wm2max0.6334650739942099
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime16:11:28.080000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0100762, 0.997149, 0.0747835, -0.0246152, 0.0745173, -0.996916]
ImageOrientationTextSag>Tra(1.4)>Cor(-0.7)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0360727
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber8
ShimSetting[2633, 5402, -7462, 143, -49, -1030, 43, -147]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp242.21
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sume60f4cfb82d2a2a247264122c139185d
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.